CRAN/E | R Packages from Evan Biederstedt

Evan Biederstedt

Author of 16 R packages

Quick info

Evan Biederstedt has worked on 16 packages so far. In total, Evan Biederstedt has worked with 25 other authors on those packages. Impressive teamwork!

Packages overview

N2R
RMTstat
Rook
conos
dendsort
edlibR
gapmap
ggrastr
hahmmr
leidenAlg
numbat
pagoda2
scITD
sccore
scistreer
vrnmf

Package details

N2R

Fast and Scalable Approximate k-Nearest Neighbor Search Methods using 'N2' Library

Peter Kharchenko , Viktor Petukhov , Dirk Eddelbuettel , Evan Biederstedt

RMTstat

Distributions, Statistics and Tests Derived from Random Matrix Theory

Iain M. Johnstone , Zongming Ma , Patrick O. Perry , Morteza Shahram , Evan Biederstedt

Rook

HTTP Web Server for R

Jeffrey Horner , Evan Biederstedt

conos

Clustering on Network of Samples

Viktor Petukhov , Nikolas Barkas , Peter Kharchenko , Weiliang Qiu , Evan Biederstedt

dendsort

Modular Leaf Ordering Methods for Dendrogram Nodes

Ryo Sakai , Evan Biederstedt

edlibR

R Integration for Edlib, the C/C++ Library for Exact Pairwise Sequence Alignment using Edit (Levenshtein) Distance

Martin Šošić , Evan Biederstedt

gapmap

Drawing Gapped Cluster Heatmaps with 'ggplot2'

Ryo Sakai , Evan Biederstedt

ggrastr

Rasterize Layers for 'ggplot2'

Viktor Petukhov , Teun van den Brand , Evan Biederstedt

hahmmr

Haplotype-Aware Hidden Markov Model for RNA

Teng Gao , Evan Biederstedt , Peter Kharchenko

leidenAlg

Implements the Leiden Algorithm via an R Interface

Peter Kharchenko , Viktor Petukhov , Yichen Wang , V.A. Traag , Gábor Csárdi , Tamás Nepusz , Minh Van Nguyen , Evan Biederstedt

numbat

Haplotype-Aware CNV Analysis from scRNA-Seq

Teng Gao , Ruslan Soldatov , Hirak Sarkar , Evan Biederstedt , Peter Kharchenko

pagoda2

Single Cell Analysis and Differential Expression

Nikolas Barkas , Viktor Petukhov , Peter Kharchenko , Simon Steiger , Rasmus Rydbirk , Evan Biederstedt

scITD

Single-Cell Interpretable Tensor Decomposition

Jonathan Mitchel , Evan Biederstedt , Peter Kharchenko

sccore

Core Utilities for Single-Cell RNA-Seq

Viktor Petukhov , Rasmus Rydbirk , Peter Kharchenko , Evan Biederstedt

scistreer

Maximum-Likelihood Perfect Phylogeny Inference at Scale

Teng Gao , Evan Biederstedt , Peter Kharchenko , Yufeng Wu

vrnmf

Volume-Regularized Structured Matrix Factorization

Ruslan Soldatov , Peter Kharchenko , Viktor Petukhov , Evan Biederstedt

Colleagues

Peter Kharchenko
Viktor Petukhov
Dirk Eddelbuettel
Iain M. Johnstone
Zongming Ma
Patrick O. Perry
Morteza Shahram
Jeffrey Horner
Nikolas Barkas
Weiliang Qiu
Ryo Sakai
Martin Šošić
Teun van den Brand
Teng Gao
Yichen Wang
V.A. Traag
Gábor Csárdi
Tamás Nepusz
Minh Van Nguyen
Ruslan Soldatov
Hirak Sarkar
Simon Steiger
Rasmus Rydbirk
Jonathan Mitchel
Yufeng Wu